genomics package¶
Submodules¶
genomics.genomics module¶
-
genomics.genomics.complement_dna(seq)¶ Returns the reverse complement of the DNA sequence ‘seq’.
- Args:
- seq (str): a DNA sequence
- Returns:
- comp_seq (str)
- Examples:
>>> complement_dna('GGC') 'GCC'
>>> complement_dna('TTTGGC') 'GCCAAA'
-
genomics.genomics.get_dna_sequence()¶ Returns a DNA sequence.
Returns: dna (str)
-
genomics.genomics.has_start_codon(rna_seq)¶ Returns True if ‘AUG’ in the RNA sequence Args:
rna_seq (str): an RNA sequence- Returns:
- has_AUG (bool): whether AUG is in the RNA
-
genomics.genomics.transcribe_dna(seq)¶ Transcribes DNA sequence to RNA sequence.
- Args:
- seq (str): a DNA sequence
- Returns:
- rna_seq (str): an RNA sequence
- Examples:
>>> transcribe_dna('GTCAA') 'UUGAC'